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Polygenic transcriptome risk scores for COPD and lung function improve cross-ethnic portability of prediction in the NHLBI TOPMed program.

Publication: Journal Article

Hu, Xiaowei, Dandi Qiao, Wonji Kim, Matthew Moll, Pallavi P Balte, Leslie A Lange, Traci M Bartz, et al. 2022. “Polygenic Transcriptome Risk Scores for COPD and Lung Function Improve Cross-Ethnic Portability of Prediction in the NHLBI TOPMed Program.”. American Journal of Human Genetics 109 (5): 857-70.

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Reproducibility in computational sleep research: a call for action.

Publication: Journal Article

Cassidy, Michael J, Danielle A Wallace, Shaun Purcell, and Tamar Sofer. 2024. “Reproducibility in Computational Sleep Research: A Call for Action.”. Sleep 47 (1).

Light exposure during sleep is bidirectionally associated with irregular sleep timing: The multi-ethnic study of atherosclerosis (MESA).

Publication: Journal Article

Wallace, Danielle A, Xinye Qiu, Joel Schwartz, Tianyi Huang, Frank A J L Scheer, Susan Redline, and Tamar Sofer. 2024. “Light Exposure During Sleep Is Bidirectionally Associated With Irregular Sleep Timing: The Multi-Ethnic Study of Atherosclerosis (MESA).”. Environmental Pollution (Barking, Essex : 1987) 344: 123258.

Trans-ethnic Fine Mapping Highlights Kidney-Function Genes Linked to Salt Sensitivity.

Publication: Journal Article

Mahajan, Anubha, Aylin R Rodan, Thu H Le, Kyle J Gaulton, Jeffrey Haessler, Adrienne M Stilp, Yoichiro Kamatani, et al. 2016. “Trans-Ethnic Fine Mapping Highlights Kidney-Function Genes Linked to Salt Sensitivity.”. American Journal of Human Genetics 99 (3): 636-46.

Xiaonan Liu

Person: PhD graduate student

Dr. Xiaonan Liu is from China and currently a G2 PhD student in Biostatistics at Harvard. Her research interests include combining deep learning and traditional statistics to study the pathway from genotype to phenotype, which could aid identifying drug target. Outside of work, she loves dancing and...

Characteristics of objectively-measured naturalistic light exposure patterns in U.S. adults: A cross-sectional analysis of two cohorts.

Publication: Journal Article

Wallace, Danielle A, Kelly R Evenson, Carmen R Isasi, Sanjay R Patel, Daniela Sotres-Alvarez, Phyllis C Zee, Susan Redline, Frank A J L Scheer, and Tamar Sofer. 2025. “Characteristics of Objectively-Measured Naturalistic Light Exposure Patterns in U.S. Adults: A Cross-Sectional Analysis of Two Cohorts.”. The Science of the Total Environment 969: 178839.

Trans-ancestry genome-wide study of depression identifies 697 associations implicating cell types and pharmacotherapies.

Publication: Journal Article

andrew.mcintosh@ed.ac.uk, Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium. Electronic address:, and Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium. 2025. “Trans-Ancestry Genome-Wide Study of Depression Identifies 697 Associations Implicating Cell Types and Pharmacotherapies.”. Cell 188 (3): 640-652.e9.

Genetic Diversity and Association Studies in US Hispanic/Latino Populations: Applications in the Hispanic Community Health Study/Study of Latinos.

Publication: Journal Article

Conomos, Matthew P, Cecelia A Laurie, Adrienne M Stilp, Stephanie M Gogarten, Caitlin P McHugh, Sarah C Nelson, Tamar Sofer, et al. 2016. “Genetic Diversity and Association Studies in US Hispanic/Latino Populations: Applications in the Hispanic Community Health Study/Study of Latinos.”. American Journal of Human Genetics 98 (1): 165-84.

Yogesh Purushotham

Person: Bioinformatician I

Yogesh is a Bioinformatician at Dr. Tamar Sofer's Lab. He holds an M.S. in Bioinformatics from Northeastern University, with a focus on data analytics. He is passionate about leveraging computational tools to uncover biological insights and contribute to advancing human health through data-driven...