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CLST, FANTOM Consortium and the RIKEN PMI and, Alistair R R Forrest, Hideya Kawaji, Michael Rehli, Kenneth Baillie, Michiel J L de Hoon, Vanja Haberle, et al. 2014. “A Promoter-Level Mammalian Expression Atlas.”. Nature 507 (7493): 462-70.

Sandberg, Cecilie Jonsgar, Gabriel Altschuler, Jieun Jeong, Kirsten Kierulf Strømme, Biljana Stangeland, Wayne Murrell, Unn-Hilde Grasmo-Wendler, et al. 2013. “Comparison of Glioma Stem Cells to Neural Stem Cells from the Adult Human Brain Identifies Dysregulated Wnt- Signaling and a Fingerprint Associated With Clinical Outcome.”. Experimental Cell Research 319 (14): 2230-43.

Lai, Peggy S, Oliver Hofmann, Rebecca M Baron, Manuela Cernadas, Quanxin Ryan Meng, Herbert S Bresler, David M Brass, et al. 2013. “Integrating Murine Gene Expression Studies to Understand Obstructive Lung Disease Due to Chronic Inhaled Endotoxin.”. PloS One 8 (5): e62910.

Sui, Shannan Ho, Emily Merrill, Nils Gehlenborg, Psalm Haseley, Ilya Sytchev, Richard Park, Philippe Rocca-Serra, et al. 2013. “The Stem Cell Commons: An Exemplar for Data Integration in the Biomedical Domain Driven by the ISA Framework.”. AMIA Joint Summits on Translational Science Proceedings. AMIA Joint Summits on Translational Science 2013: 70.

Rocca-Serra, Philippe, Marco Brandizi, Eamonn Maguire, Nataliya Sklyar, Chris Taylor, Kimberly Begley, Dawn Field, et al. 2010. “ISA Software Suite: Supporting Standards-Compliant Experimental Annotation and Enabling Curation at the Community Level.”. Bioinformatics (Oxford, England) 26 (18): 2354-6.

Voight, Benjamin F, Laura J Scott, Valgerdur Steinthorsdottir, Andrew P Morris, Christian Dina, Ryan P Welch, Eleftheria Zeggini, et al. 2010. “Twelve Type 2 Diabetes Susceptibility Loci Identified through Large-Scale Association Analysis.”. Nature Genetics 42 (7): 579-89.

Lal, Ashish, Francisco Navarro, Christopher A Maher, Laura E Maliszewski, Nan Yan, Elizabeth O’Day, Dipanjan Chowdhury, et al. 2009. “MiR-24 Inhibits Cell Proliferation by Targeting E2F2, MYC, and Other Cell-Cycle Genes via Binding to ‘seedless’ 3’UTR MicroRNA Recognition Elements.”. Molecular Cell 35 (5): 610-25.

Gauron, Maria Celeste, Dmitry Prokopenko, Sanghun Lee, Sarah A Wolfe, Julian Hecker, Julian Willett, Mohammad Waqas, et al. 2025. “A PKCη Missense Mutation Enhances Golgi-Localized Signaling and Is Associated With Recessively Inherited Familial Alzheimer’s Disease.”. Science Signaling 18 (893): eadv0970.

Hahn, Georg, Dmitry Prokopenko, Julian Hecker, Sharon M Lutz, Kristina Mullin, Leinal Sejour, Winston Hide, et al. 2024. “Prediction of Disease-Free Survival for Precision Medicine Using Cooperative Learning on Multi-Omic Data.”. Briefings in Bioinformatics 25 (4).