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Lenz, Tobias L.#, Aaron Deutsch, Buhm Han, Xinli Hu, Yukinori Okada, Stephen Eyre, Michael Knapp, et al. 2015. “Widespread Non-Additive and Interaction Effects Within HLA Loci Modulate the Risk of Autoimmune Diseases”. Nat Genet 47 (9): 1085-90.

Franke, Andre, Dermot McGovern, Jeffrey Barrett, Kai Wang, Graham Radford-Smith, Tariq Ahmad, Charlie Lees, et al. 2010. “Genome-Wide Meta-Analysis Increases to 71 the Number of Confirmed Crohn’s Disease Susceptibility Loci”. Nat Genet 42 (12): 1118-25.

Janse, Marcel, Laetitia Lamberts, Lude Franke, Soumya Raychaudhuri, Eva Ellinghaus, Kirsten Muri Boberg, Espen Melum, et al. 2011. “Three Ulcerative Colitis Susceptibility Loci Are Associated With Primary Sclerosing Cholangitis and Indicate a Role for IL2, REL, and CARD9”. Hepatology 53 (6): 1977-85.

Stahl, Eli, and Soumya Raychaudhuri. 2012. “Rheumatoid Arthritis. Evidence for a Genetic Component to Disease Severity in RA”. Nat Rev Rheumatol 8 (6): 312-3.

Lin, Chen, Elizabeth Karlson, Helena Canhao, Timothy Miller, Dmitriy Dligach, Pei Jun Chen, Raul Natanael Guzman Perez, et al. 2013. “Automatic Prediction of Rheumatoid Arthritis Disease Activity from the Electronic Medical Records”. PLoS One 8 (8): e69932.

Liao, Katherine, Fina Kurreeman, Gang Li, Grant Duclos, Shawn Murphy, Raul Guzman, Tianxi Cai, et al. 2013. “Associations of Autoantibodies, Autoimmune Risk Alleles, and Clinical Diagnoses from the Electronic Medical Records in Rheumatoid Arthritis Cases and Non-Rheumatoid Arthritis Controls”. Arthritis Rheum 65 (3): 571-81.

DIAbetes Genetics Replication And Meta-analysis (DIAGRAM) Consortium, Asian Genetic Epidemiology Network Type Diabetes (AGEN-T2D) Consortium, South Asian Type Diabetes (SAT2D) Consortium, Mexican American Type Diabetes (MAT2D) Consortium, Type Diabetes Genetic Exploration Nex-generation Samples (T2D-GENES) Consortium, Anubha Mahajan, Min Jin Go, et al. 2014. “Genome-Wide Trans-Ancestry Meta-Analysis Provides Insight into the Genetic Architecture of Type 2 Diabetes Susceptibility”. Nat Genet 46 (3): 234-44.

Liao, Katherine, Tianxi Cai, Guergana Savova, Shawn Murphy, Elizabeth Karlson, Ashwin Ananthakrishnan, Vivian Gainer, et al. 2015. “Development of Phenotype Algorithms Using Electronic Medical Records and Incorporating Natural Language Processing”. BMJ 350: h1885.

Yu, Sheng, Katherine Liao, Stanley Shaw, Vivian Gainer, Susanne Churchill, Peter Szolovits, Shawn Murphy, Isaac Kohane, and Tianxi Cai. 2015. “Toward High-Throughput Phenotyping: Unbiased Automated Feature Extraction and Selection from Knowledge Sources”. J Am Med Inform Assoc 22 (5): 993-1000.

Budu-Aggrey, Ashley, John Bowes, Philip Stuart, Matthew Zawistowski, Lam Tsoi, Rajan Nair, Deepak Rohit Jadon, et al. 2017. “A Rare Coding Allele in IFIH1 Is Protective for Psoriatic Arthritis”. Ann Rheum Dis 76 (7): 1321-24.