Search

Search results

32 results found

Functionally distinct disease-associated fibroblast subsets in rheumatoid arthritis

Publication: Journal Article

Mizoguchi, Fumitaka#, Kamil# Slowikowski, Jennifer L. Marshall, Kevin Wei, Deepak A. Rao, Sook Kyung Chang, Hung N. Nguyen, et al. 2018. “Functionally Distinct Disease-Associated Fibroblast Subsets in Rheumatoid Arthritis”. Nature Communications 9 (789).

Genetic landscape of interactive effects of HLA-DRB1 alleles on susceptibility to ACPA(+) rheumatoid arthritis and ACPA levels in Japanese population

Publication: Journal Article

Terao, Chikashi, Yukinori Okada, Katsunori Ikari, Yuta Kochi, Akari Suzuki, Koichiro Ohmura, Keitaro Matsuo, et al. 2017. “Genetic Landscape of Interactive Effects of HLA-DRB1 Alleles on Susceptibility to ACPA(+) Rheumatoid Arthritis and ACPA Levels in Japanese Population”. Journal of Medical Genetics 54 (12): 853-58.

Functional genomics of stromal cells in chronic inflammatory diseases.

Publication: Journal Article

Slowikowski, Kamil, Kevin Wei, Michael B. Brenner, and Soumya Raychaudhuri. 2018. “Functional Genomics of Stromal Cells in Chronic Inflammatory Diseases.”. Current Opinion in Rheumatology 30 (1): 65-71.

IMPACT: Genomic annotation of cell-state-specific regulatory elements inferred from the epigenome of bound transcription factors

Publication: Journal Article

Amariuta, Tiffany, Yang Luo, Steven Gazal, Emma Elisabeth Davenport, Bryce Geijn, Kazuyoshi Ishigaki, Harm-Jan Westra, et al. 2019. “IMPACT: Genomic Annotation of Cell-State-Specific Regulatory Elements Inferred from the Epigenome of Bound Transcription Factors”. The American Journal of Human Genetics 104 (5): 879-95.

Benchmarker: An Unbiased, Association-Data-Driven Strategy to Evaluate Gene Prioritization Algorithms

Publication: Journal Article

Fine, Rebecca, Tune Pers, Tiffany Amariuta, Soumya Raychaudhuri, and Joel Hirschhorn. 2019. “Benchmarker: An Unbiased, Association-Data-Driven Strategy to Evaluate Gene Prioritization Algorithms”. American Journal of Human Genetics 104 (6): 1025-39.

Early progression to active tuberculosis is a highly heritable trait driven by 3q23 in Peruvians

Publication: Journal Article

Luo, Suliman, Asgari, Amariuta, Baglaenko, Martinez-Bonet, Ishigaki, et al. 2019. “Early Progression to Active Tuberculosis Is a Highly Heritable Trait Driven by 3q23 in Peruvians”. Nature Communications 10 (3765).

Dana Macfarlane

Person: Technical Research Assistant

I graduated with my BA from Temple University in 2018 and moved to Boston in the fall of 2018. At first, I worked in the prominent biotech industry area in Cambridge, but joined the Raychaudhuri lab in the fall of 2019 for better academic opportunity. I work mainly alongside Yuriy on projects...

Kamil Slowikowski graduates from Harvard and joins Massachusetts General Hospital

News: August 13, 2019

Kamil and Soumya, Countway Library of Medicine, Boston, MA. 2019. Examination Chairman: Peter Kharchenko Examiners: Chirag Patel, I-Cheng Ho, and Jeffrey Browning Kamil graduated from the Bioinformatics and Integrative Genomics PhD program at Harvard University in Boston, MA. His dissertation was...

Distinct fibroblast subsets drive inflammation and damage in arthritis

Publication: Journal Article

Croft, AP, Campos, Jansen, JD Turner, Marshall, Attar, Savary, et al. 2019. “Distinct Fibroblast Subsets Drive Inflammation and Damage in Arthritis”. Nature 570: 246-51.

Mixed Effects Association of Single Cells Identifies an Expanded Th1-Skewed Cytotoxic Effector CD4+ T Cell Subset in Rheumatoid Arthritis.

Publication: Journal Article

Fonseka, Chamith, Deepak A.# Rao, Nikola C. Teslovich, Susan K. Hannes, Kamil Slowikowski, Michael F. Gurish, Laura T. Donlin, et al. 2018. “Mixed Effects Association of Single Cells Identifies an Expanded Th1-Skewed Cytotoxic Effector CD4+ T Cell Subset in Rheumatoid Arthritis.”. Science Translational Medicine 10 (463).