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Pouget, Jennie, Vanessa Gonçalves, Schizophrenia Working Group Psychiatric Genomics Consortium, Sarah Spain, Hilary Finucane, Soumya Raychaudhuri, James Kennedy, and Jo Knight. 2016. “Genome-Wide Association Studies Suggest Limited Immune Gene Enrichment in Schizophrenia Compared to 5 Autoimmune Diseases”. Schizophr Bull 42 (5): 1176-84.

Sparks, Jeffrey, Medha Barbhaiya, Elizabeth Karlson, Susan Ritter, Soumya Raychaudhuri, Cassandra Corrigan, Fengxin Lu, et al. 2017. “Investigating Methotrexate Toxicity Within a Randomized Double-Blinded, Placebo-Controlled Trial: Rationale and Design of the Cardiovascular Inflammation Reduction Trial-Adverse Events (CIRT-AE) Study”. Semin Arthritis Rheum.

Aung, Tin, Mineo Ozaki, Mei Chin Lee, Ursula Schlötzer-Schrehardt, Gudmar Thorleifsson, Takanori Mizoguchi, Robert Igo, et al. 2017. “Genetic Association Study of Exfoliation Syndrome Identifies a Protective Rare Variant at LOXL1 and Five New Susceptibility Loci”. Nat Genet 49 (7): 993-1004.

Cui, Jing, Saedis Saevarsdottir, Brian Thomson, Leonid Padyukov, Annette Helm-van Mil, Joanne Nititham, Laura Hughes, et al. 2010. “Rheumatoid Arthritis Risk Allele PTPRC Is Also Associated With Response to Anti-Tumor Necrosis Factor Alpha Therapy”. Arthritis Rheum 62 (7): 1849-61.

Raychaudhuri, Sutphin, Chang, and Altman. 2001. “Basic Microarray Analysis: Grouping and Feature Reduction”. Trends Biotechnol 19 (5): 189-93.

Altman, and Raychaudhuri. 2001. “Whole-Genome Expression Analysis: Challenges Beyond Clustering”. Curr Opin Struct Biol 11 (3): 340-7.

Kraft, Peter, and Soumya Raychaudhuri. 2009. “Complex Diseases, Complex Genes: Keeping Pathways on the Right Track”. Epidemiology 20 (4): 508-11.

Voight, Benjamin, Laura Scott, Valgerdur Steinthorsdottir, Andrew Morris, Christian Dina, Ryan Welch, Eleftheria Zeggini, et al. 2010. “Twelve Type 2 Diabetes Susceptibility Loci Identified through Large-Scale Association Analysis”. Nat Genet 42 (7): 579-89.

Croft, AP, Campos, Jansen, JD Turner, Marshall, Attar, Savary, et al. 2019. “Distinct Fibroblast Subsets Drive Inflammation and Damage in Arthritis”. Nature 570: 246-51.

Fonseka, Chamith, Deepak A.# Rao, Nikola C. Teslovich, Susan K. Hannes, Kamil Slowikowski, Michael F. Gurish, Laura T. Donlin, et al. 2018. “Mixed Effects Association of Single Cells Identifies an Expanded Th1-Skewed Cytotoxic Effector CD4+ T Cell Subset in Rheumatoid Arthritis.”. Science Translational Medicine 10 (463).