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Bakker, Paul, Manuel Ferreira, Xiaoming Jia, Benjamin Neale, Soumya Raychaudhuri, and Benjamin Voight. 2008. “Practical Aspects of Imputation-Driven Meta-Analysis of Genome-Wide Association Studies”. Hum Mol Genet 17 (R2): R122-8.

Raychaudhuri, Soumya, Stephan Ripke, Mingyao Li, Benjamin Neale, Jesen Fagerness, Robyn Reynolds, Lucia Sobrin, et al. 2010. “Associations of CFHR1-CFHR3 Deletion and a CFH SNP to Age-Related Macular Degeneration Are Not Independent”. Nat Genet 42 (7): 553-5; author reply 555.

Cui, Taylor, Lee, Källberg, Weinblatt, Coblyn, Klareskog, et al. 2014. “The Influence of Polygenic Risk Scores on Heritability of Anti-CCP Level in RA”. Genes Immun 15 (2): 107-14.

Brownstein, Catherine, Alan Beggs, Nils Homer, Barry Merriman, Timothy Yu, Katherine Flannery, Elizabeth DeChene, et al. 2014. “An International Effort towards Developing Standards for Best Practices in Analysis, Interpretation and Reporting of Clinical Genome Sequencing Results in the CLARITY Challenge”. Genome Biol 15 (3): R53.

Raychaudhuri, Stuart, and Altman. 2000. “Principal Components Analysis to Summarize Microarray Experiments: Application to Sporulation Time Series”. Pac Symp Biocomput, 455-66.

Kivi, Mårten, Xuemin Liu, Soumya Raychaudhuri, Russ Altman, and Peter Small. 2002. “Determining the Genomic Locations of Repetitive DNA Sequences With a Whole-Genome Microarray: IS6110 in Mycobacterium Tuberculosis”. J Clin Microbiol 40 (6): 2192-8.

Orozco, Gisela, Steve Eyre, Anne Hinks, Xiayi Ke, Wellcome Trust Case Control YEAR Consortium, Anthony Wilson, Deborah Bax, et al. 2010. “Association of CD40 With Rheumatoid Arthritis Confirmed in a Large UK Case-Control Study”. Ann Rheum Dis 69 (5): 813-6.

Frisell, Thomas, Karin Hellgren, Lars Alfredsson, Soumya Raychaudhuri, Lars Klareskog, and Johan Askling. 2016. “Familial Aggregation of Arthritis-Related Diseases in Seropositive and Seronegative Rheumatoid Arthritis: A Register-Based Case-Control Study in Sweden”. Ann Rheum Dis 75 (1): 183-9.

McLaren, Paul, Cedric Coulonges, István Bartha, Tobias L. Lenz, Aaron Deutsch, Arman Bashirova, Susan Buchbinder, et al. 2015. “Polymorphisms of Large Effect Explain the Majority of the Host Genetic Contribution to Variation of HIV-1 Virus Load”. Proc Natl Acad Sci U S A 112 (47): 14658-63.

Viatte, Sebastien, Darren Plant, Buhm Han, Bo Fu, Annie Yarwood, Wendy Thomson, Deborah Symmons, et al. 2015. “Association of HLA-DRB1 Haplotypes With Rheumatoid Arthritis Severity, Mortality, and Treatment Response”. JAMA 313 (16): 1645-56.