Assessing statistical significance in causal graphs
Chindelevitch, Leonid, Po-Ru Loh, Ahmed Enayetallah, Bonnie Berger, and Daniel Ziemek. 2012. “Assessing Statistical Significance in Causal Graphs”. BMC Bioinformatics 13: 35.
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Assessment of chemical mixtures and groundwater effects on Daphnia magna transcriptomics
Garcia-Reyero, Natàlia, Lynn Escalon, Po-Ru Loh, Jennifer Laird, Alan Kennedy, Bonnie Berger, and Edward Perkins. 2012. “Assessment of Chemical Mixtures and Groundwater Effects on Daphnia Magna Transcriptomics”. Environ Sci Technol 46 (1): 42-50.
Compressive genomics
Loh, Po-Ru*, Michael* Baym, and Bonnie Berger. 2012. “Compressive Genomics”. Nat Biotechnol 30 (7): 627-30.
Building quantitative prediction models for tissue residue of two explosives compounds in earthworms from microarray gene expression data
Gong, Ping, Po-Ru Loh, Natalie Barker, George Tucker, Nan Wang, Chenhua Zhang, Lynn Escalon, Bonnie Berger, and Edward Perkins. 2012. “Building Quantitative Prediction Models for Tissue Residue of Two Explosives Compounds in Earthworms from Microarray Gene Expression Data”. Environ Sci Technol 46 (1): 19-26.
The genetic prehistory of southern Africa
Pickrell, Joseph, Nick Patterson, Chiara Barbieri, Falko Berthold, Linda Gerlach, Tom Güldemann, Blesswell Kure, et al. 2012. “The Genetic Prehistory of Southern Africa”. Nat Commun 3: 1143.